6.10.1. Certificate Not Found/Serial Number Not Found Errors
The IPA information is stored in a separate LDAP directory than the certificate information, and these two LDAP databases are replicated separately. It is possible for a replication agreement to be broken for one directory and working for another, which can cause problems with managing clients.
Specifically, if the replication agreement between the two CA databases is broken, then a server may not be able to find certificate information about a valid IPA client, causing certificate errors:
For example, an IPA server and replica have a function replication agreement between their IPA databases, but the replication agreement between their CA databases is broken. If a host is created on the server, the host entry is replicated over to the replica — but the certificate for that host is not replicated. The replica is aware of the client, but any management operations for that client will fail because the replica doesn't have a copy of its certificate.